Publications

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2011
Analyzing stationary States of gene regulatory network using petri nets., Gambin, Anna, Lasota Sławomir, and Rutkowski Michał , Studies in health technology and informatics, 2011, Volume 162, p.143-59, (2011)
Circulating tenascin-C levels in patients with dilated cardiomyopathy in the course of Emery-Dreifuss muscular dystrophy., Niebroj-Dobosz, Irena, Madej-Pilarczyk Agnieszka, Marchel Michał, Sokołowska Beata, and Hausmanowa-Petrusewicz Irena , Clinica chimica acta; international journal of clinical chemistry, 08/2011, Volume 412, Issue 17-18, p.1533-8, (2011)
ESTIMATION OF SIGNIFICANCE OF ALKB AND ALKA PROTEINS IN DNA REPAIR IN ESCHERICHIA COLI MODEL, Sokołowska, Beata, Maciejewska Agnieszka M., Jóźwik Adam, and Kuśmierek Jarosław T. , (2011)
Extraction of biomedical traits for patients with Amyotrophic Lateral Sclerosis using parallel and hierarchical classifiers, Jóźwik, Adam, Sokołowska Beata, Niebroj-Dobosz Irena, and Janik P. , International Journal of Biometrics, Volume 3, Number 1, p.85–94, (2011)
A genistein derivative, ITB-301, induces microtubule depolymerization and mitotic arrest in multidrug-resistant ovarian cancer., Ahmed, Ahmed Ashour, Goldsmith Juliet, Fokt Izabela, Le Xiao-Feng, Krzyśko Krystiana A., Lesyng Bogdan, Bast Robert C., and Priebe Waldemar , Cancer chemotherapy and pharmacology, 10/2011, Volume 68, Issue 4, p.1033-44, (2011)
Interactions of benzo[a]pyrene and diesel exhaust particulate matter with the lung surfactant system., Sosnowski, Tomasz R., Koliński Michał, and Gradoń Leon , The Annals of occupational hygiene, 04/2011, Volume 55, Issue 3, p.329-38, (2011)
Modeling of ligand binding to G protein coupled receptors: cannabinoid CB1, CB2 and adrenergic β 2 AR., Latek, Dorota, Koliński Michał, Ghoshdastider Umesh, Debinski Aleksander, Bombolewski Rafal, Plazinska Anita, Jozwiak Krzysztof, and Filipek Sławomir , Journal of molecular modeling, 09/2011, Volume 17, Issue 9, p.2353-66, (2011)
A novel method to compare protein structures using local descriptors., Daniluk, Paweł, and Lesyng Bogdan , BMC bioinformatics, 08/2011, Volume 12, p.344, (2011)
Osteopontin--a fibrosis-related marker--in dilated cardiomyopathy in patients with Emery-Dreifuss muscular dystrophy., Niebroj-Dobosz, Irena, Madej-Pilarczyk Agnieszka, Marchel Michał, Sokołowska Beata, and Hausmanowa-Petrusewicz Irena , Scandinavian journal of clinical and laboratory investigation, 12/2011, Volume 71, Issue 8, p.658-62, (2011)
The role of AlkB protein in repair of 1,N⁶-ethenoadenine in Escherichia coli cells., Maciejewska, Agnieszka M., Sokołowska Beata, Nowicki Adam, and Kuśmierek Jarosław T. , Mutagenesis, 05/2011, Volume 26, Issue 3, p.401-6, (2011)
2010
Chloroacetaldehyde-induced mutagenesis in Escherichia coli: the role of AlkB protein in repair of 3,N(4)-ethenocytosine and 3,N(4)-alpha-hydroxyethanocytosine., Maciejewska, Agnieszka M., Ruszel Karol P., Nieminuszczy Jadwiga, Lewicka Joanna, Sokołowska Beata, Grzesiuk Elzbieta, and Kuśmierek Jarosław T. , Mutation research, 2010 Feb 3, Volume 684, Issue 1-2, p.24-34, (2010)
Erythropoietin concentration in serum and cerebrospinal fluid of patients with amyotrophic lateral sclerosis., Janik, P., Kwiecinski H., Sokołowska Beata, and Niebroj-Dobosz Irena , Journal of neural transmission (Vienna, Austria : 1996), 2010 Mar, Volume 117, Issue 3, p.343-7, (2010)
Matrix metalloproteinases and their tissue inhibitors in serum and cerebrospinal fluid of patients with amyotrophic lateral sclerosis., Niebroj-Dobosz, Irena, Janik P., Sokołowska Beata, and Kwiecinski H. , European journal of neurology : the official journal of the European Federation of Neurological Societies, 2010 Feb, Volume 17, Issue 2, p.226-31, (2010)
PATTERN RECOGNITION APPROACH FOR ANALYSIS OF METABOLIC RESPONSE TO INTERMITTENT HYPOXIA, Sokołowska, Beata, and Jóźwik Adam , (2010)
Structural investigation of the C-terminal catalytic fragment of presenilin 1., Sobhanifar, Solmaz, Schneider Birgit, Löhr Frank, Gottstein Daniel, Ikeya Teppei, Mlynarczyk Krzysztof, Pulawski Wojciech, Ghoshdastider Umesh, Koliński Michał, Filipek Sławomir, et al. , Proceedings of the National Academy of Sciences of the United States of America, 2010 May 25, Volume 107, Issue 21, p.9644-9, (2010)
Study of a structurally similar kappa opioid receptor agonist and antagonist pair by molecular dynamics simulations., Koliński, Michał, and Filipek Sławomir , Journal of molecular modeling, 2010 Oct, Volume 16, Issue 10, p.1567-76, (2010)
2009
Analysis of postural sway in patients with normal pressure hydrocephalus: effects of shunt implantation., Czerwosz, Leszek, Szczepek Ewa, Blaszczyk J. W., Sokołowska Beata, Dmitruk K., Dudziński Krzysztof, Jurkiewicz Jerzy, and Czernicki Zbigniew , European journal of medical research, 2009 Dec 7, Volume 14 Suppl 4, p.53-8, (2009)
Classification of peptide mass fingerprint data by novel no-regret boosting method., Gambin, Anna, Szczurek Ewa, Dutkowski Janusz, Bakun Magda, and Dadlez Michał , Computers in biology and medicine, 2009 May, Volume 39, Issue 5, p.460-73, (2009)
Evaluation of matrix metalloproteinases in serum of patients with amyotrophic lateral sclerosis with pattern recognition methods., Sokołowska, Beata, Jóźwik Adam, Niebroj-Dobosz Irena, Janik P., and Kwiecinski H. , Journal of physiology and pharmacology : an official journal of the Polish Physiological Society, 2009 Nov, Volume 60 Suppl 5, p.117-20, (2009)
Generation and characterization of a novel, permanently active S100P mutant., Austermann, Judith, Nazmi Ali Reza, Heil Annika, Fritz Günter, Koliński Michał, Filipek Sławomir, and Gerke Volker , Biochimica et biophysica acta, 2009 Jun, Volume 1793, Issue 6, p.1078-85, (2009)
Matrix metalloproteinases in serum of Emery-Dreifuss muscular dystrophy patients., Niebroj-Dobosz, Irena, Madej-Pilarczyk Agnieszka, Marchel Michał, Sokołowska Beata, and Hausmanowa-Petrusewicz Irena , Acta biochimica Polonica, 2009, Volume 56, Issue 4, p.717-22, (2009)
Modeling exopeptidase activity from LC-MS data., Kluge, Bogusław, Gambin Anna, and Niemiro Wojciech , Journal of computational biology : a journal of computational molecular cell biology, 2009 Feb, Volume 16, Issue 2, p.395-406, (2009)
Nucleotide excision repair and recombination are engaged in repair of trans-4-hydroxy-2-nonenal adducts to DNA bases in Escherichia coli., Janowska, Beata, Komisarski Marek, Prorok Paulina, Sokołowska Beata, Kuśmierek Jarosław T., Janion Celina, and Tudek Barbara , International journal of biological sciences, 2009, Volume 5, Issue 6, p.611-20, (2009)
Population dynamics of miniature inverted-repeat transposable elements (MITEs) in Medicago truncatula., Grzebelus, Dariusz, Gładysz Mirosława, Macko-Podgórni Alicja, Gambin Tomasz, Golis Barbara, Rakoczy Roksana, and Gambin Anna , Gene, 2009 Dec 15, Volume 448, Issue 2, p.214-20, (2009)

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